Substitutions performed at the National Centre for Health Data and Disease Control in Denmark (SSI)

Number

208-EN

Section

General Section

Use

Sector

Health services
Other

Function

Dye
Cleaning agent

Process

Manual activities involving hand contact

Product category

laboratory chemicals
washing ad cleaning products

Application

Substitution Trypan Blue

Abstract

SSI have managed to substitute boric acid, ethidium bromide and ether with acetic acid, a non-mutagenic DNA dye and sodium hydroxide. They are currently working on validation of an alternative to Trypan Blue in cell staining.

Substituted substances

Boric acid

CAS No. 10043-35-3 EC No. 233-139-2 Index No. 005-007-00-2

Chemical group

Boron compounds; inorganic acids

Classification: hazard statements

H360FD May damage fertility. May damage the unborn child

Other adverse effects

The substance is: endocrine disruptor cat. 1 (EU EDC database), as listed in the Substance Database according to SUBSPORT Screening Criteria (SDSC).

Ethidium bromide

CAS No. 1239-45-8 EC No. 214-984-6 Index No. 612-278-00-6

Chemical group

Bromine compounds; nitrogen heterocycles

Classification: hazard statements

H341 Suspected of causing genetic defects
H330 Fatal if inhaled
H302 Harmful if swallowed

Diethylether

CAS No. 60-29-7 EC No. 200-467-2 Index No. 603-022-00-4

Chemical group

Ether

Classification: hazard statements

H224 Extremely flammable liquid and vapour
H302 Harmful if swallowed
H336 May cause drowsiness or dizziness

Trypan blue

CAS No. 72-57-1 EC No. 200-786-7 Index No.

Chemical group

Azo compound

Other adverse effects

The substance is: 2B carcinogen (IARC) as listed in the Substance Database according to SUBSPORT Screening Criteria (SDSC).

Alternative Substances

Acetic acid

CAS No. 64-19-7 EC No. 200-580-7 Index No. 607-002-00-6

Chemical group

Organic acid

Classification: hazard statements

H226 Flammable liquid and vapour
H314 Causes severe skin burns and eye damage

Sodium hydroxide

CAS No. 1310-73-2 EC No. 215-185-5 Index No. 011-002-00-6

Chemical group

Sodium compounds; hydroxides

Classification: hazard statements

H314 Causes severe skin burns and eye damage

Nigrosin (acid black 2)

CAS No. 8005-03-6 EC No. Index No.

Chemical group

Dyes

Reliability of information

Evidence of assessment: there is evidence of an official (positive) assessment of the substitution
Evidence of implementation: there is evidence that the solution was implemented and in use at time of publication

Reason substitution

CMR
ED
neurotoxicant

Hazard Assessment

Substances to be substituted: Ethidium bromide is not listed in the SUBSPORTplus Database and has no harmonised classification according to Annex VI of Regulation (EC) No 1272/2008 (CLP Regulation). Boric acid may is a Substance of very high concern and is included on the REACH candidate list for authorization, according to Article 59 of Regulation (EG) No. 1907/2006. (REACH Regulation). Diethyl ether is not listed in the SUBSPORTplus Database and has no harmonised classification according to Annex VI of Regulation (EC) No 1272/2008 (CLP Regulation). Trypan Blue is a Substance of very high concern and is included on the REACH restriction list, according to Article 73 of Regulation (EG) No. 1907/2006. (REACH Regulation). Alternative substances: Acetic acid is not listed in the SUBSPORTplus Database. Sodium hydroxide is not listed in the SUBSPORTplus Database. Nigrosine (acid black 2) is not listed in the SUBSPORTplus Database and has no harmonised classification according to Annex VI of Regulation (EC) No 1272/2008 (CLP Regulation).

Description of Substitution

SSI is performing advanced diagnostics, health data analysis and vaccine production. Being an international reference laboratory, they have to validate every substitution they make according to GMP (Good Manufacturing Practice), GLP (Good Laboratory Practice) and various ISO-standards. Handling of communicable disease agents require strict disinfection procedures able to inactivate all viruses, bacterial- and fungal spores, as do vaccine production where all protein residues have to be removed between batches; this means that they are still dependent on chlorine based cleaning agents, but they have, through improved management, been able to continuously reduce the amounts. Since the majority proportion of the laboratory staffs are women, many of them between age 20 and 45, substituting CMR-chemicals has been a high priority. The staffs have been open minded regarding implementation of substitutions and novel procedures, and are in general keen on continuing the work on safer chemical agents and technological solutions. A substantial number of diagnostics involves gel electrophoresis of DNA, RNA and proteins, which means handling of gel- and running buffers containing boric acid. TBE-buffer (tris(hydroxymethyl)aminomethane, boric acid, EDTA) used to be the standard, but TAE-buffer (tris(hydroxymethyl)aminomethane, acetic acid, EDTA) works equally well except in rare cases with very reduced band resolution where TBE has to be used. This means that the use of boric acid has dropped to a minimum. Ethidium bromide used for visualization of DNA on gels has been phased out in a number of SSI laboratories, substituted by the much less hazardous EZ-vision™ Three DNA Dye. Degreasing of glass ware and steel beads in vaccine production is now done with sodium hydroxide solution instead of diethyl ether with excellent result. Comments to substituted chemicals: TBE-buffers have been substituted with TAE-buffers in almost all analyses involving gel electrophoresis. There are a few exceptions where the resolutions of DNA, RNA or protein bands are hard to retain, and in those specific cases TBE is still in use. Nigrosine (Acid Black 2) is on trial for substituting Trypan Blue in cell staining and visualization. The substitution needs full validation before it is put to use in standard diagnostics. EZ-vision™ Three DNA Dye has substituted Ethidium Bromide in a number of laboratories.According to the producer this is a non-toxic and non- mutagenic DNA dye.

Case/substitution evaluation

SSI is an international reference laboratory and have to follow strict regulations according to diagnostics and vaccine production. Therefore substitutions are time demanding processes that have to pass several cycles of validation. The beneficial part is that all substitutions perform according to some of the strictest level of regulations (Good Manufacturing Practice, Good Laboratory Practice and several ISO standards). MDSD on EZ-vision is provided by VWR / Bie & Berntsen. The full content could not be evaluated by SUBSPORTplus. The alternatives are all less hazardous and can therefore be considered as positive substitutes.

State of implementation

In use

Enterprise using the alternative

SSI National Institute for Health Data and Disease Control www.ssi.dk">http://www.ssi.dk">www.ssi.dk

Availability of Alternative

On the market.

Type of information supplier

Authority
Research
User

Contact

www.ssi.dk

Date, reviewed

November 26, 2021